Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVKDILTKELVVFDLEATTKETAIEEMAEMLDERGILADKATYVQAVLEREAHSTTGIGNNIAIPHGKSE---SVTKSAIVFARTKEMIEWESLDDEPVNMIFLLAITDSDKTDGHLKILAEIATKLMDDDIVESLKNTRDKEEVIRILNGGVVEI
1A3A Chain:A ((4-147))
---LFKLGAENIFLGRKAATKEEAIRFAGEQLVKGGYV--EPEYVQAMLDREKLTPTYLGESIAVPHGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARN----NEHIQVITSLTNALDDESVIERLAHTTSVDEVLELLAGR----
General information:
TITO was launched using:
RESULT:
Template:
1A3A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84730 for 1133 contacts (-74.8/contact) +
2D Compatibility (PS) -15672 + (NN) -7842 + (LL) 1276
1D Compatibility (HY) -10400 + (ID) 2150
Total energy: -119518.0 ( -105.49 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_1A3A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A3A-query.scw
PDB file :
Tito_Scwrl_1A3A.pdb
: