Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MLKKRLLLASRWIIMLIIYAGL--WTYTLFQ-GD--TASWFLTYFFSFILLLLFLSS----IYPLKAWKVNRSFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQ----QKIPATFGKVRARQQVVYPLFK---KQFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPNVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFYGASH-----PNFELSLRAAYSFIRKISEENGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHSGEKILL-FTPCMDTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEQASLLSRWERETK |
| 4K7J Chain:A ((26-375)) | GLLTDYGNASASPWMKKLQSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDGGIGWVYPAN---VKGQRMAAVRHNGNWQSLT-SRNNTGDFPLGGILAHTGSGGSMTLTASDGIASKQRVSLFAKPLLAEQTLTVNG-----------NTVSANGGGWQVLDTGAALP----LTIHTEM-PWDIGFINIENPAGGITVSAMGINGAQ----LTQWSK--------WRADRMNDLAQTG-------ADLVILSYGTNEAFNNNIDIADTEQKWLDTVRQIRDSLPAAGILIIG------APESLKNTLGVCGTR-----PVRLTEVQQMQRRVARQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFS---AKGYRRAAEML--ADSLEELVRSA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105542 for 2758 contacts (-38.3/contact) +
2D Compatibility (PS) -34571 + (NN) -6202 + (LL) 3556
1D Compatibility (HY) -6400 + (ID) 3350
Total energy: -152509.0 ( -55.30 by residue)
QMean score : 0.272
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