Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------MKLLLKNINELAAKQKSEGLTAFEKERQAALRQEYLKKIRGTVQDNLHHVTIIDPLGDDVTPKKLKEIQAELRG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4TR2 Chain:A ((54-627)) | DDVHKIISELRFLQKVETILESSNMSVSDVEADANAYNPDRDAPKEELQKLQDKKSLRLIVSENHATSPSFFEESLL------QEDVVSFIQSKGKLSNLKNLK--SMIIDLNSDMTDEELAEYISLLERKGALIESDKLVGADYKFNDEYRNLQWGLDLARLDETQDLINANRVSVTKICVIDSGIDYNHPDLRNNIDVNVKELHGRKGVDDDSNGVVDDVYGANFVNNSGDPMDDNYHGTHVSGIISAVGNNGIGIVGVDGHSKLVICKALDQHKLGRLGDMFKCIDYCISRQAHMINGSFSFDEYSNIFNASVEHLRSLGILFFVSASNCAHDKLSKPDIAKCDLAVNHRYPPILSKTHNNVIAVANLKRDLDESYSLSVNSFYSNIYCQLAAPGTNIYSTTPMNNYRKLNGTSMASPHVAAIASIVRSINPNLTYLQIVEILRNAIVKLPSLTERVSWGGYVDILRAVNLAIDSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3776 for 373 contacts (-10.1/contact) +
2D Compatibility (PS) -7272 + (NN) -3195 + (LL) 884
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -18059.0 ( -48.42 by residue)
QMean score : 0.500
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