Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLALPCDADQLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
2K19 Chain:A ((1-98))
MGKLKWFSGG----------KERSNQAE--NIITDLLDDLKTDLDNESLKKVLENYLEELKQKSAS---------VPLILSRMNLDISKAIRNDGVTLSDYQSKKLKELTSISNIRYGY
General information:
TITO was launched using:
RESULT:
Template:
2K19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22932 for 634 contacts (-36.2/contact) +
2D Compatibility (PS) -10243 + (NN) -2613 + (LL) 1236
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -38952.0 ( -61.44 by residue)
QMean score : 0.090
(partial model without unconserved sides chains):
PDB file :
Tito_2K19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K19-query.scw
PDB file :
Tito_Scwrl_2K19.pdb
: