Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAGREKLEIVGNLAKRMVEKAGVDMEVHLTLDREEALKDADFVTTQLRVGLLDARVKDERIPNSYGVVGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVLRYSNQKKVVGLCNGPIGIERNIAETLGVD-VSEIYVEFVGLNHMVFAKTVYH-NGKDVTKDVVFKMTEDEAG-SSLKN-IN-ATGWDKTFL-RTLNMIPIDYLRYYWQTKQQLEDQARAYAEHGTRAEVVKKV-EAELFELYKQEELAEKPKQLEQRGGAYYSEAACNLINSIYNDKRDIQIVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAEAAVTGDYDKALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK |
| 1U8X Chain:X ((26-465)) | -KKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK--ERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNSKILNICDMPVGIEDRMAQILGLSSRKEMKVRYYGLNHFGWWTSIQDQEGNDLMPKLKEHVSQYGYIPKT---SWNDTFAKARDVQAADPDTLPNTYLQYYLFPDDMVKKSN----PNHTRANEVMEGREAFIFSQCDMITREQSSENS-EIKIDDHASYIVDLARAIAYNTGERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITVGTIPQFQKGLMEQQVSVEKLTVEAWAEKSFQKLWQALILSKTVPNARVARLILEDLVEANKDFWPELD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165015 for 3788 contacts (-43.6/contact) +
2D Compatibility (PS) -45882 + (NN) -14709 + (LL) 944
1D Compatibility (HY) -23600 + (ID) 6500
Total energy: -254762.0 ( -67.26 by residue)
QMean score : 0.526
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