Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MVVADYLALFAVICIWGLLLINIVLIVAGYVYYLKN-------------EARKVPEIPVEVPFVSVMVPAHNEGKVIVKTVESLLAFDYPVDRYEIIVINDNSSDNSAELLAAIQAKNPTRFLKIINTDNITGGKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGEITNDAKLGAVIGKFRTRNRNASWLTRFINIETLSFQWMAQAGRWALFK-----------LCTIPGTNFIVRRSLLEEIGGWDVK---AVAEDTEISFRIYMMGYRIKFQAKA-VTWEQEPQTLPVWFKQRSRWAKGNIYVILKNVP----LLFKREGRRVRFDILYFL------SIYFLLLTSLIVSDVLLVLYALG-----LVHTTLAGLSGALWLLAILLFVAGTFITLTTEKGEISFSNLLFIMLMYVTYCQLWMVVAAYGFFIFLKDTVLKRETKWYKTERF---------------------------------------------------------------------------------------------------------- |
| 2Z86 Chain:A ((4-625)) | IDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELLIIDGLSIVIPTYNRAKILAITLACLCNQKTI-YDYEVIVADDGSKENIEEIVREFESLL-----NIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPESVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGPFKHINKICYNRVLHSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195959 for 3073 contacts (-63.8/contact) +
2D Compatibility (PS) -44224 + (NN) -16507 + (LL) 512
1D Compatibility (HY) -2800 + (ID) 2850
Total energy: -261828.0 ( -85.20 by residue)
QMean score : 0.295
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