Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQKEMLNFDYYNPTHIIFGKNRFNELNEVIPQ-DK-KVLILYGGGSVERFGTLDKVKAA--LKSREVGEFGGIEANPTYETLIKAIQLVKEENYDFLLAVGGGSVIDGTKFVAAGALFDGEPMDIFGSGIGEKRPITKALPFGTVLTLPATGSEMNSGGVITFVEKKAKLGFGSAYTYPVFSLLDPELTYTLPKRQLANGIMDAYVHVMEQYMTYPVGALLQDRYAESLLQTLIEIGPDVIKEDNHDYNTRATFMWSATNALNGTLSRGVPQDWASHSLGHEITALYGIDHARTLAIVLPSLLNVRRSEKHDKLVQYAERVWGITSGS-DEEKIDAAILKTREFFESLGAGTRFSDYGLGEEVVDLLVDQLDRHGLTNISERGDQTLEVSRQIYTNAL
3OX4 Chain:A ((2-383))-----ASSTFYIPFVNEMGEGSLEKAIKDLNGSGFKNALIVSDAFM-NKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAIALVATNGGEVKDYEGID---K-SKKPALPLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHVTPMVSVNDPLLMVGMPKGLTAATGMDALTHAFEAYSSTA-ATPITDACALKAASMIAKNLKTACDNGK-DMPAREAMAYAQFLAGMAFN---NASLGYVHAMAHQLGGYYNLPHGVCNAVLLPHVLAYNASVVAGRLKDVGVAMGLDIANLGDKEGAEATIQAVRDLAASIGIPANLTELGAKKEDVPLLADHALKDA-CALTNPRQGDQKEVEELFLSAF


General information:
TITO was launched using:
RESULT:

Template: 3OX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173391 for 3583 contacts (-48.4/contact) +
2D Compatibility (PS) -40440 + (NN) -15837 + (LL) 1444
1D Compatibility (HY) -7200 + (ID) 4100
Total energy: -239524.0 ( -66.85 by residue)
QMean score : 0.425

(partial model without unconserved sides chains):
PDB file : Tito_3OX4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OX4-query.scw
PDB file : Tito_Scwrl_3OX4.pdb: