Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSFQALFIEKEADNTSLHFRETTIDNLPENEVTIEVHYSGINYKDGLAVLPDGKIVSEYPFIPGIDASGVVVNSKSDQFQVGDEVIVTSYDFGVSYFGGYSEFIRVPAEWVVPLPDGLSLKEAMILGTAGFTAALSVDALEFSGVTP-NAGKIAVSGATGGVGSLSSAILSKRGFSVVASSGKSDAKEFLEKFGVSEIVSREAFQPEKVRALDKQLYAGAIDCVGGKPLSYLLTAVQYGGAVTTCGMSAGGKLDTTVFPFILRGIQLFGIDSVLCP----MSKRERIWNRLA-TDYKLTNLESLATEIAFSELPESLHQVMNGGVTGRYLVKVK
3NX4 Chain:A ((1-324))---MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQD-GEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAES--RPLEKQLWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFY---AQ--AATEITLADAPKFADAIINNQVQGRTLVKIK


General information:
TITO was launched using:
RESULT:

Template: 3NX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -209644 for 2970 contacts (-70.6/contact) +
2D Compatibility (PS) -34058 + (NN) -14515 + (LL) 1012
1D Compatibility (HY) -26800 + (ID) 7050
Total energy: -291055.0 ( -98.00 by residue)
QMean score : 0.624

(partial model without unconserved sides chains):
PDB file : Tito_3NX4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NX4-query.scw
PDB file : Tito_Scwrl_3NX4.pdb: