Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VGIPILKLGECLLISIQSELDDHTAVEFQEDLLAKIHETSARGVVIDITSIDFIDSFIAKILGDVVSMSKLMGAKVVVTGIQPAVAITLIELGITFSGVLSAMDLESGLEKLKQELGE
1SBO Chain:A ((7-110))
---DIVEQDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSKKKIVLDLSSVSYMDSAGLGTLVVILKDAKINGKEFILSSLKESISRILKLTHLDK-IFKITDTVEEA----------
General information:
TITO was launched using:
RESULT:
Template:
1SBO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98127 for 785 contacts (-125.0/contact) +
2D Compatibility (PS) -10873 + (NN) -1152 + (LL) 1112
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -115190.0 ( -146.74 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_1SBO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SBO-query.scw
PDB file :
Tito_Scwrl_1SBO.pdb
: