Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRAILIGVLIILLIAMILIVLLPAILAMVGAVLGFWSLKKLLEARSVGEKVIYGVLIGVGALIILANLKGILVVVIIGAIIYFLTRNKNKPRKNDDVFDYPYNK |
2CNY Chain:B ((1-19)) | ---------------------------------------------------------------------------------GSFLPNSEQQKSVDAVFSS---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 762 for 41 contacts (18.6/contact) +
2D Compatibility (PS) -1768 + (NN) 2666 + (LL) 9648
1D Compatibility (HY) 0 + (ID) 200
Total energy: 11108.0 ( 270.93 by residue)
QMean score : 0.445
|
|
|