Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNG--LHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLG-KFPLPLEVIPFGWKQVERKLEKEHIQTNLRK--QSSGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANGEIELIKK
1LK7 Chain:B ((7-223))
----KKIAAKEALKFIEDDMVIGLGTGSTTAYFIKLLGEKLKRGEISDIVGVPTSYQAKLLAIEHDIPIASLDQVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDERKLVDYLCQKMPVPIEVIPQAWKAIIEELSIFNAKAELRMGVNKDGPV-ITDNGNFIIDAKFPRIDDPLDMEIELNTIPGVIENGIFADIADIVIVGTREG-------
General information:
TITO was launched using:
RESULT:
Template:
1LK7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93575 for 1827 contacts (-51.2/contact) +
2D Compatibility (PS) -23206 + (NN) -7961 + (LL) 1464
1D Compatibility (HY) -18800 + (ID) 4400
Total energy: -146478.0 ( -80.17 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_1LK7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LK7-query.scw
PDB file :
Tito_Scwrl_1LK7.pdb
: