Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPSKKKKIVVIGRSNLQNLYIHTVLLKKLPAEIYLID---DQAKTSVQDFDYASYYHAD-VTIHSGTFNECRNADIVVFF---QEEMSNQIVSKEDNVALIIEKVKKMMATGFRGIVLVATAESNVVAALIKRFSGLSANQIITLGTMLATSYFQVEIAKLFKISPKNVHGYIIGDNAEDVIPVWSRAFLGGKPILSYLAEDQKRISAEDLQNLTKMITKIPDFPFE--NKDGCTFRFSTVTVLAELTEVILRDEARVITVGVEVKEAYGLENPVFISVPAVIGAEGVRELLELNLSDDEQKELKQIAAKTTEKLEELQLNKGGIS
2LDB Chain:D ((8-305))------RVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW--DYDDCRDADLVVICAGA-------LDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRK-LVESK------DLE---RIFVNVRDAAYQIIEKKGATY-YGIAMGLARVTRAILHNENAILTVSAYLDGLYG-ERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAA-----------------


General information:
TITO was launched using:
RESULT:

Template: 2LDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -244777 for 2319 contacts (-105.6/contact) +
2D Compatibility (PS) -28662 + (NN) -7357 + (LL) 2692
1D Compatibility (HY) -28800 + (ID) 4800
Total energy: -311704.0 ( -134.41 by residue)
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_2LDB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LDB-query.scw
PDB file : Tito_Scwrl_2LDB.pdb: