Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSKKKKIVVIGRSNLQNLYIHTVLLKKLPAEIYLID---DQAKTSVQDFDYASYYHAD-VTIHSGTFNECRNADIVVFF---QEEMSNQIVSKEDNVALIIEKVKKMMATGFRGIVLVATAESNVVAALIKRFSGLSANQIITLGTMLATSYFQVEIAKLFKISPKNVHGYIIGDNAEDVIPVWSRAFLGGKPILSYLAEDQKRISAEDLQNLTKMITKIPDFPFE--NKDGCTFRFSTVTVLAELTEVILRDEARVITVGVEVKEAYGLENPVFISVPAVIGAEGVRELLELNLSDDEQKELKQIAAKTTEKLEELQLNKGGIS |
2LDB Chain:D ((8-305)) | ------RVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW--DYDDCRDADLVVICAGA-------LDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRK-LVESK------DLE---RIFVNVRDAAYQIIEKKGATY-YGIAMGLARVTRAILHNENAILTVSAYLDGLYG-ERDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAA----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244777 for 2319 contacts (-105.6/contact) +
2D Compatibility (PS) -28662 + (NN) -7357 + (LL) 2692
1D Compatibility (HY) -28800 + (ID) 4800
Total energy: -311704.0 ( -134.41 by residue)
QMean score : 0.583
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