Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSILVTGANGQLGTELVQLLKEHN-------LTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAAFTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFG---KYGNNFVYSML-KLAETHKELKVVNDQLGRPTYTYDLADFIRFVIEK---NPAY-GIYQFSNSGTATWFEFATEILKDKDVT---VNPCTSDEFPQKAERPKTSIMSLEKVEKLGFNIPTWQDALVRFKK |
| 2YDX Chain:C ((5-278)) | --VLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQ-PDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNP-PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPIT-DSPVLGAQRPRNAQLDCSKLETLG--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102589 for 2090 contacts (-49.1/contact) +
2D Compatibility (PS) -27758 + (NN) -9957 + (LL) 1672
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -156232.0 ( -74.75 by residue)
QMean score : 0.497
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