Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIRERILADMQVAETIDAHEEIRKSVEFLKAYLKKNTFLKSFVLGISGGQDSTLTGKLAQMAISEMRAETGDDEYRFFAVSLPYGTQLDESDRQDALNFMEPDNRLTVNIKASVDASVAALAEAGVE-LSDFAKGNEKARERMKVQYAIAAMHKGVVVGTDHSAEAVTGFYTKYGDGGTDINPLFRLNKRQGKALLKELGCPEHLYLKKPTADLEDNKPALPDEVALGVTYDQIDDYLEGKEVPADAAAKIENWFIKTEHKRHMAITIFDDFWK |
2PZA Chain:B ((1-272)) | MTLQEQIMKALHVQPVIDPKAEIRKRVDFLKDYVKK-TGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGN--ATFIAVRLPYKVQKDEDDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNKGNVKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTKRQGRALLQELGADERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLEGKTVPADVAEKIEKRYTVSEHKRQVPASMFDDWWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30585 for 2243 contacts (-13.6/contact) +
2D Compatibility (PS) -29880 + (NN) -16715 + (LL) -52
1D Compatibility (HY) -22400 + (ID) 7650
Total energy: -107282.0 ( -47.83 by residue)
QMean score : 0.483
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