Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEQLQTLKSEAETQINEASDLKTLNDLRVKYLGKKGPMTEIMKQMGKLSAEERPKMGSLANEVRTALTEAISSKQQILETEAINEKLKSETIDVTLPGTAPSIGTKHLLTQVIEEMEDMFIGMGYEIAEGPEVELDYYNFEALNLPKDHPARDMQDSFYITENTLLRTQTSPVQARTMEKHDFSKGPIKVICPGKVYRRDNDDATHSHQFTQIE------------GLVVGENITFA-----------------------DLKGTLTVLAKTMFGEEREIRLRPSFFPFTEPSVEMDISCFKCGGKGCRVCKGTGWIEILGSGMVHPNVLEMSGIDSTRYSGFAFGLGPERVAMLKYAVDDIRHLYTNDLRFTKQFQSTETGEI |
3HFV Chain:A ((87-307)) | -----------------------------------------------------------------------------------------------------------------------------------------WQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQWDLLHA-----GLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINF------------HGEWLEVLGCGVMEQQLVNSAGAQDR--IGWAFGLGLERLAMILYDIPDIRLFWCEDERFLKQF-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56165 for 1231 contacts (-45.6/contact) +
2D Compatibility (PS) -19064 + (NN) -3645 + (LL) 11608
1D Compatibility (HY) -18000 + (ID) 3900
Total energy: -89166.0 ( -72.43 by residue)
QMean score : 0.222
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