Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEQLQTLKSEAETQINEASDLKTLNDLRVKYLGKKGPMTEIMKQMGKLSAEERPKMGSLANEVRTALTEAISSKQQILETEAINEKLKSETIDVTLPGTAPSIGTKHLLTQVIEEMEDMFIGMGYEIAEGPEVELDYYNFEALNLPKDHPARDMQDSFYITENTLLRTQTSPVQARTMEKHDFSKGPIKVICPGKVYRRDNDDATHSHQFTQIE------------GLVVGENITFA-----------------------DLKGTLTVLAKTMFGEEREIRLRPSFFPFTEPSVEMDISCFKCGGKGCRVCKGTGWIEILGSGMVHPNVLEMSGIDSTRYSGFAFGLGPERVAMLKYAVDDIRHLYTNDLRFTKQFQSTETGEI
3HFV Chain:A ((87-307))-----------------------------------------------------------------------------------------------------------------------------------------WQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQWDLLHA-----GLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINF------------HGEWLEVLGCGVMEQQLVNSAGAQDR--IGWAFGLGLERLAMILYDIPDIRLFWCEDERFLKQF--------


General information:
TITO was launched using:
RESULT:

Template: 3HFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56165 for 1231 contacts (-45.6/contact) +
2D Compatibility (PS) -19064 + (NN) -3645 + (LL) 11608
1D Compatibility (HY) -18000 + (ID) 3900
Total energy: -89166.0 ( -72.43 by residue)
QMean score : 0.222

(partial model without unconserved sides chains):
PDB file : Tito_3HFV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HFV-query.scw
PDB file : Tito_Scwrl_3HFV.pdb: