Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQ-GQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTR--KTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKNINPEVIVFVDNCYGEFAEYLEPTEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALIDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEFGVVADPTWDAPRTDLIQSISFHNKEKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL |
| 3I16 Chain:A ((19-425)) | ---VLKLYETAMNDIQNQFKILDDIREFNQLKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHISMEALKGAILCSRIMELAGFEVMPKYDEKRSDIIQSIKFNDKDKLIEFCKGIQTGSPIDSFVSCEPWDM---TDQVIMAAGAFIQGSSIELSADAPIREPYIAYLQGGLTFDHAKIGILIALSRI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223451 for 3641 contacts (-61.4/contact) +
2D Compatibility (PS) -43232 + (NN) -23020 + (LL) 4
1D Compatibility (HY) -36800 + (ID) 9650
Total energy: -336149.0 ( -92.32 by residue)
QMean score : 0.514
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