Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKIFQEKVGPVALTIVPTQKYKSNKIVFKFRAPLER---ETVTKRALLSILLETNSEKYPTQTDFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVSDGNHILEDAFAFMEQALFRPNVANDAFNEETLTREKENLKSSLEGIYDDKIRFASKRLVEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDTIEIFICGDVTKEEVMPLI-EKMAFSPRPERKGI--FYTK--EAPKEVRVIHEQQAINQGKLVLGYQTETLFGDDDFVALQLANGLLGG-------F--ANSKIFINVREKASLAYYASSRIDS--FKGYM--IISAGIDEVNYEQALKIIEEQVVAMKQGNFTDDELNQTKEMLINQLLETNDQAQGLIELVYNNVLR-DANLDLENWIAKIKQATKEEVVAAINKIKPD-T-IYFLSKGGEELHGKNHI |
| 1HR6 Chain:B ((8-431)) | ----RTSKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGTQNRP-QQGIELEIENI-GSHLNAYTSRE----NTVYYAKSLQE--------DIPKAVDILSDILTKS-----VLDNSAIERERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKNYKGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRGERFIKENTLPTTHIAIALEGV-SWSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSYADSGLWGMYIVTDSNEHNVRLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRLQNKPVSMVALGNTSTV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HR6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165176 for 3239 contacts (-51.0/contact) +
2D Compatibility (PS) -43477 + (NN) -21347 + (LL) 636
1D Compatibility (HY) -8000 + (ID) 3000
Total energy: -240364.0 ( -74.21 by residue)
QMean score : 0.533
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