Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYELPKLPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAVAGHPELASKSAEELVTNLDSVPEDIRGAVRNHGGGHANHTLFWSILSPNGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNDGKLEIVSTANQDSPLSD------GKTPVLGLDVWEHAYYLKFQNRRPEYIETFWNVINWDEANKRFDAAK
3KKY Chain:B ((2-211))
-AYTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEG-TEFADLPVEQLIQQLDRVPADKKGALRNNAGGHANHSMFWQIMGQ--ANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVKDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAK
General information:
TITO was launched using:
RESULT:
Template:
3KKY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74687 for 1563 contacts (-47.8/contact) +
2D Compatibility (PS) -20802 + (NN) -5922 + (LL) 0
1D Compatibility (HY) -21200 + (ID) 6100
Total energy: -128711.0 ( -82.35 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_3KKY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KKY-query.scw
PDB file :
Tito_Scwrl_3KKY.pdb
: