Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKLAKKWRDWYIESGKKYLFPLLLVCFAVIAYFLVCQMTKPESYNVKLFQVAEKTIRSPQTVEDTEKTKEERTKASDAVEDVYVYNRETGQNRVALIQSLFAYVNEVNAEAQEKDTKNKEKAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISDEVFTTLIEAKSKDFNVMEDVVTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYYKNVSKALVSYAIVPNEVYDEEQTDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYRQLKMLHLLDQKMPVKQYAGFAIFIIALAAILFLYTKKQTQPKAKKMQTMLIFSSVYLVSLFMLFIILFLETQNIANIAFLFPAAFAPMILKILLNEKYAFLSVIFIAVTSLLTFQNDATSGITIFILLSGATSVVMLRDYSRRSAIMLSGFMVGLINMIYVLLLLLINNSTLLQVSTLMALGYAFLGGFGAFILGVGVIPLFETIFGLLTTSRLVELANPNHPLLKKILMKAPGTYHHSMMVANLAEACADKIG------ANS---LLVRVGCFYHDIGKTLRPPYFVENQLQGINPHDRLTPEQSRDIILSHTKDGAEILKENHMP-------QPIIDIALQHHGTTLLKYFYF--KAKETNPDVKEADYRYSGPKPQTKEIAIINISDSVEAAVRSS--TEPTMAKI-TEIIDGIIKDRFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD |
1U6Z Chain:A ((318-497)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TASSLANQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHS--------------------------GLHRHSAYILQNSDLPGFNQEQQLMMATLVRYHRKAIKL-DDLPRFTLFKK-KQ-------------FLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLR----FPHDWFSQNALVLLDLEKEQEYWEGVA--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U6Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61474 for 1129 contacts (-54.4/contact) +
2D Compatibility (PS) -16763 + (NN) -4910 + (LL) 46244
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -38853.0 ( -34.41 by residue)
QMean score : 0.323
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