Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPLILIILGSVLCGCLIIFFLNIAKSRGMKKKVKQLTTEKAELERQLAAAKAMKTHSSKVEKRDTENAVDTTK
3RA3 Chain:B ((3-27))
-------------------------------------------------------------------RRLKQKNARLKQEIAALEYEIAALE----------------------
General information:
TITO was launched using:
RESULT:
Template:
3RA3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6966 for 92 contacts (75.7/contact) +
2D Compatibility (PS) -2837 + (NN) -2363 + (LL) 8904
1D Compatibility (HY) -1200 + (ID) 500
Total energy: 8970.0 ( 97.50 by residue)
QMean score : 0.840
(partial model without unconserved sides chains):
PDB file :
Tito_3RA3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RA3-query.scw
PDB file :
Tito_Scwrl_3RA3.pdb
: