Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILLIDNYDSFTFNLEQYLAEF-SEVVVKRNDAADLIKIAALADGIVLSPGPGKPSDA-GLLEEVVAK-FAKEKPLLGICLGHQAIGEVFGGEVKRAAKIRHGKVSTMRQ-TAGAIFANLPEEMPVMRYHSLIVDKNTLPDVLEVLAIATDDSEVMAMKVKDYPVYGLQFHPESIGTNDGKQMMENFIHIVEGARENGNLTTKSI
2A9V Chain:A ((15-207))
KIYVVDNGGQWTHREWRVLRELGVDTKIVPNDI-DSSELDG-LDGLVLSGGAPNIDEELDKLGSVGKYIDDHNYPILGICVGAQFIALHFGASVVKAKHPEFG-KTKVSVMHSENIFGGLPSEITVWENHNDEII--NLPDDFTLAASSA-TCQVQGFYHKTRPIYATQFHPEVEHTQYGRDIFRNFIGICASYREIQK------
General information:
TITO was launched using:
RESULT:
Template:
2A9V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91571 for 1605 contacts (-57.1/contact) +
2D Compatibility (PS) -20276 + (NN) -6999 + (LL) 812
1D Compatibility (HY) -8000 + (ID) 2900
Total energy: -128934.0 ( -80.33 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_2A9V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A9V-query.scw
PDB file :
Tito_Scwrl_2A9V.pdb
: