Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPAVIGVIMGSTSDWDTMKKACDVLDELEIAYEKKVVSAHRTPDLMFQYAEQARERGLKIIIAGAGGAAHLPGMVAAKTTLPVIGVPIKSKALNGMDSLLSIVQMPGGVPVATVAIGESGAVNAGLLAAQILSITDDAITNRLQKRRATLEETVLESSDYLG
1U11 Chain:B ((23-176))
---VVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNS-----
General information:
TITO was launched using:
RESULT:
Template:
1U11.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123236 for 1286 contacts (-95.8/contact) +
2D Compatibility (PS) -16689 + (NN) -4874 + (LL) 204
1D Compatibility (HY) -15600 + (ID) 4900
Total energy: -165095.0 ( -128.38 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_1U11.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U11-query.scw
PDB file :
Tito_Scwrl_1U11.pdb
: