Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------ISKDMLVNDGIRA-REVRLIDQDGEQLGVKSKIDALQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRF---AKACEDLCTIEQRPKMDGRSMFLVLAPLHEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 1SQ9 Chain:A ((3-395)) | KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG-----LHHVDVLQAIERDAFELCLVATTSFS--------GDLLFYRITREDE---TKKVIFEKLDLLDSDMKKHSFWALKWGASN--------------SHRLVATDVKGTTYIWKFHPFADESNSL-TLNWSPTLELQG--TVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHNNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 41009 for 837 contacts (49.0/contact) +
2D Compatibility (PS) -13950 + (NN) 4992 + (LL) 2860
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: 26111.0 ( 31.20 by residue)
QMean score : 0.273
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