Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIQGLTIAYKQKVAIDNVTLQIASGKLTGIVGPNGAGKSTLLKGMMGLIPREQGQVTL-ADKPLTY-WRKKIAYVPQRSEVDLTFPITVFDMVLLGTYPALGLIKRPGKKEKQLALDALEQV--EMTGFMKRQIGELSGGQLQRVFIARALAQHAEIFFLDEPFAGIDMTSEALIMRLLKKLRDNGKTIVVVHHDFHKVAAYFDDIILLNKKLVAHGPVEQTFTEEKIQFAYGDAPVAFAAGV
4ZIR Chain:A ((20-214))
-----------EKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGE--KGYEIRRNIGIAFQYPE-DQFFAERVFDEVAFAVKNFY-----PDRDPVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILISHDIETVINHVDRVVVLEK--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4ZIR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138248 for 1429 contacts (-96.7/contact) +
2D Compatibility (PS) -20639 + (NN) -10438 + (LL) 4140
1D Compatibility (HY) -14400 + (ID) 3200
Total energy: -182785.0 ( -127.91 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_4ZIR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZIR-query.scw
PDB file :
Tito_Scwrl_4ZIR.pdb
: