Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTKKGSLQLAIQRVYSTVLALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVSSVLVSHILLEQSLSFFWFKNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMRQILTEMTQGLRNQSEYHDEFGLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDMRLVQYRILTQMKRHLVAFDHSSEQSMALAEITEKTAQTLDEHNTAED--LVAEITKMVHEFRSSKLPETRAEFENRAI--LFQFM-NDLRYLLEMKRDFYAEFGLKEKEMTRGR |
| 3HHC Chain:A ((34-196)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------ARGCHIAQFKSLSPQELQAFKRAKDALEESLLLKDCKCRSRLFPRTWDLRQ-LQVRERPVALEAELALTLKVLEATADTDPALGDVLDQPLHTLHHILSQLRACIQGRLHHWLHRLQEAPKKESPGCLEASVTFNLFRLLTRDLNCVASGDLCV--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9782 for 1024 contacts (-9.6/contact) +
2D Compatibility (PS) -15611 + (NN) -4224 + (LL) 18968
1D Compatibility (HY) -5600 + (ID) 950
Total energy: -17199.0 ( -16.80 by residue)
QMean score : 0.323
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