Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKWKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSPKVAALQANSNVETEIYPDGWASSLRKEVTNFYQLEEEELIFTAGVDELIELLTRVLLDTTKNTVMATPTFVQYRQNALIEGAEVREIPLLTDGAHDLEGMLNAIDEKTTIVWICNPNNPTGNYIDLADIQAFLDKVPS-DILVVLDEAYIEYVTPQPKKHEKLIRTYKNLIITRTFSKIYGLASARVGYGIAD-KEIINQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRISNANGIKQYEAFAKRFEQV-KLYPANGNFVLIDLGI-EARTIFSYLEKNGYITRSGAALG--FPTAVRITIGKEEENSAVIALLEKLL |
3FTB Chain:A ((28-357)) | ------------------------------LLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKI-DDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLENISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIKDEKKNTKFLRALKGV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151401 for 2686 contacts (-56.4/contact) +
2D Compatibility (PS) -35254 + (NN) -19176 + (LL) 2364
1D Compatibility (HY) -23200 + (ID) 4050
Total energy: -230717.0 ( -85.90 by residue)
QMean score : 0.497
|
|
|