Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQKKVAILGAGSWGTGLALVLADNNHKPVIWGNLDKIVNEINESHTNSHYLPDIILPTEVKATLSLDEAIDGAEIVVIAIPTNAMRIVCKQLNEALKEPTILVHVSKGIEPETNLRMSEVIEEEIDAAKRKALVVLSGPSHAEEVALRHPTTLCASCKDLSAAEIVQDRFINNNLRIYTNDDVIGAEIGGALKNIIALGAGISDGLGYGDNAKAALMTRGMAEITRLGVAVGSNPQTFYGLTGIGDLIVTCTSVHSRNWRAGNMLGK-GENLDEVL--EKMGMVVEGVRTAKAVHGWAKKLDIDMPITESIYAILFENKDAREAVDLLMGREKKIEKESF |
1Z82 Chain:A ((14-325)) | --EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSP-YVEESK--ITVRATNDLEE-IKKEDILVIAIPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEIL---G-CPYAVLSGPSHAEEVAKKLPTAVTLAGENS---KELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIARGFN-PLKLLESS--NQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVVYEGKPPLQSMRDLMR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214378 for 2836 contacts (-75.6/contact) +
2D Compatibility (PS) -32569 + (NN) -5046 + (LL) 2544
1D Compatibility (HY) -25200 + (ID) 6900
Total energy: -281549.0 ( -99.28 by residue)
QMean score : 0.564
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