Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKICIAIDGPAAAGKSTVAKIVAKKLRFVYIDTGAMYRAVTYIALKNNIAYEDEKAIAALLQKTVIRF--EPGEVQQVFVGSENVTEVIRSIEVTNHVSIVAAHPSIREALQERQQVFATEGGIVMDGRDIGTAVLPNAELKIFLLASVEERAERRYKENMAKGFTGDLDQLKKEIEERDHLDYTRTHSPLKKADDAIEVDTTSMSIDQVANKILSLAELKINN
1KDP Chain:B ((8-224))------ITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEG-EDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQKL--


General information:
TITO was launched using:
RESULT:

Template: 1KDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113924 for 1684 contacts (-67.7/contact) +
2D Compatibility (PS) -23271 + (NN) -11347 + (LL) 460
1D Compatibility (HY) -13200 + (ID) 4650
Total energy: -165932.0 ( -98.53 by residue)
QMean score : 0.649

(partial model without unconserved sides chains):
PDB file : Tito_1KDP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KDP-query.scw
PDB file : Tito_Scwrl_1KDP.pdb: