Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VGGLMKKNTLILGIESSCDETAASVV-KNGNEIISSVVASQIESHKRFGGVVPEIASRHHVEQITLVIEEALKQANVTMDDLDGVAVTEGPGLVGALLIGVNAAKTLAFMHNLPLVGVHHIAGHIYANRFETEFK---FPLLSLVVSGGHTELVLMKADNEFEIIGETRDDAAGEAYDKVARTLGLAYPGGVQIDK-----LAKDGED-----TFHFPRAMMDEGS----FDFSFSGLKSSFINTLHNLR----QRGEEPNPNDMAASFQASVVDVLVSKTIRAAKQY-----DVKQLLLAGGVAANQGLRERLIQEVKLELPETELI---IPPLALCGDNAAMIAAAGTVSFLQGKRSGFDMNANPGLLLEDI |
| 3WUH Chain:B ((7-363)) | ------KGYKVLAIETSCDDTCVSVLDRFSKSAAPNVLANLKDTL---------KAHIHHQARIGPLTERALIESNAR-EGIDLICVTRGPGMPGSLSGGLDFAKGLAVAWNKPLIGVHHMLGHLLIPRMGTNGKVPQFPFVSLLVSGGHTTFVLSRAIDDHEILCDTIDIAVGDSLDKCGRELGFK---GTMIAREMEKFINQDINDQDFALKLEMPS-------KRNMLSFSFSAFITALRTNLTKLGKTEIQELPEREIRSIAYQVQESVFDHIINKLKHVLKSQPEKFKNVREFVCSGGVSSNQRLRTKLETEL---------FNFYYPPMDLCSDNSIMIGWAG-IEIWESLRLVSDLDICP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WUH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169590 for 2480 contacts (-68.4/contact) +
2D Compatibility (PS) -32598 + (NN) -12101 + (LL) 2428
1D Compatibility (HY) -21200 + (ID) 5600
Total energy: -238661.0 ( -96.23 by residue)
QMean score : 0.433
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