Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLVNMKQLLEVAKENKFAVGAFNVADSNFLRVVVEEAEKNNAPAIIAVHP-TELDFTKDDFFQYVLARIKNSPVPFVLHLDHGDNMGDVMRAVRCGFSSVMIDGSLLPFEENIRVTKEVVDVCHKLGVSVEGELGTIGKTGNSIEGGVSEIIYTKPEEAEEYISRTGVDTLAVAIGTAHGIYPKDKEPKLRLDILKEIKALVNIPLVLHGGSANPDAEIAAAVEIGIQKVNISSDYKYAFYKKCREILSTTELWDANAIYPDC-IDAAKEVVKYKMGLFESIGQVEKYQQAKTTAWRSELI
1GVF Chain:B ((3-284))-IISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVE--------SAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLY--SKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRI----------------


General information:
TITO was launched using:
RESULT:

Template: 1GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152984 for 2370 contacts (-64.6/contact) +
2D Compatibility (PS) -29847 + (NN) -14345 + (LL) 1820
1D Compatibility (HY) -24400 + (ID) 5100
Total energy: -224856.0 ( -94.88 by residue)
QMean score : 0.605

(partial model without unconserved sides chains):
PDB file : Tito_1GVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GVF-query.scw
PDB file : Tito_Scwrl_1GVF.pdb: