Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKLNGKVAVVTGAASGMGQQIAILFAKEGAKVVVADLN-LEAAQKTVELVEKEHGTGLAVVANVTKQEDIENMINQAIEAFGTLDILVNNAGIMDNFVPAGELTDELWDKVFAINTTGVMRATREALHIFEEKG-QGVIVNIASAGGLFGSRAGAAYTASKHAVVGFTKNVGFQYANKNIRCNAIAPGAVNTNIGTTIYA-PDEFGQERAMIGMGINPRAGDASEIAKVALFLASDDSSFVNGTVITADAGWTAY |
| 3AY6 Chain:B ((13-261)) | ---LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGV-ENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGY---IGKPEEVAAVAAFLASSQASYVTGITLFADGGMTKY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AY6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134075 for 2145 contacts (-62.5/contact) +
2D Compatibility (PS) -27320 + (NN) -9639 + (LL) 188
1D Compatibility (HY) -20000 + (ID) 4950
Total energy: -195796.0 ( -91.28 by residue)
QMean score : 0.509
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