Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKVGLLVMAYGTPYKDEDIERYYTDIRHGHKPSEEMIADLRGRYHAIGGLSPLAKITEAQAYGLEKALND-SQDEVEFKAYIGLKHIEPFIEDAVEAMHKDGIEEAISIVLAPHYSSFSVEA--------YNKRAKEAADKLGGPRINAINDWYKQPKFIQMWADRINETAKQIPADELLDTVLIVSAHSLPEKIKQHNDPYPNQLQETADFIFEKV-VVPHYALGWQSEGKTGE-PWLGPDVQDLTRELYGREKYKHFIYTPVGFVAEHLEVLYDNDYE-CKVVTDEVGA-AYHRPPMPNSDPEFLEVLRTVVWEKYSN |
| 3HCN Chain:B ((58-321)) | --------------------------------------------QYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKW-----STIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQS--KVGPMPWLGPQTDESIKGLCERGR-KNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81994 for 1879 contacts (-43.6/contact) +
2D Compatibility (PS) -26729 + (NN) -11810 + (LL) 2872
1D Compatibility (HY) -17200 + (ID) 4250
Total energy: -139111.0 ( -74.03 by residue)
QMean score : 0.480
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