Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPKKHARNTFDLPDETAAELFRRVPKIARALKEALPIQGLNILNNNEEVAFQSVFHCHIHLIPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD
3LB5 Chain:D ((28-139))
-NNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADGITVMQFNEAASQQTVYHLHFHIIPR-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3LB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67143 for 738 contacts (-91.0/contact) +
2D Compatibility (PS) -11128 + (NN) -4503 + (LL) 2728
1D Compatibility (HY) -9600 + (ID) 2450
Total energy: -92096.0 ( -124.79 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_3LB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LB5-query.scw
PDB file :
Tito_Scwrl_3LB5.pdb
: