Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQKLIYFLSQTH-IRSAIAEAWAKRLSLSNVKFISGSWHKSKSTPFIAEALNEFAIEPPESLSYSPSSELLADADLIVTIYDSAHETAPKFPANIQEKIIYWDIDDPEQEIALPQKWASYQEVCDNIALSVKNLEHVLIEA
2L17 Chain:A ((1-131))
--MKKVMFVCKRNSCRSQMAEGFAKTLGAGKIAVTSCGLESSRVHPTAIAMMEEVGIDISGQTSDPIENFNADDYDVVISLCGCGVNLPPEWVTQ--EIFEDWQLEDPDGQ-----SLEVFRTVRGQVKERVENLIAKIS--
General information:
TITO was launched using:
RESULT:
Template:
2L17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66660 for 1075 contacts (-62.0/contact) +
2D Compatibility (PS) -14229 + (NN) -11014 + (LL) 1336
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -97867.0 ( -91.04 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_2L17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L17-query.scw
PDB file :
Tito_Scwrl_2L17.pdb
: