Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNVWVLIPLVAIISWMVVEIFS
1GK6 Chain:A ((355-379))
----MKQLEDKVEELLSKNYHLENEVARL----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1GK6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 802 for 92 contacts (8.7/contact) +
2D Compatibility (PS) -2721 + (NN) -1715 + (LL) 3604
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -1630.0 ( -17.72 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_1GK6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GK6-query.scw
PDB file :
Tito_Scwrl_1GK6.pdb
: