Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIKQAIIKLETILENGNAIESGSFVKYSVIKNILSLLEKD------------QELKIIEMKVELNGVEDSIENATLLEKRLIEAKSLVEDLASTINSLEIKVK--------
1SE9 Chain:A ((1-101))
-EAEVHNQLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLISAGKVLEN-----------SKTVKDYRSPVSNLAGAVTTMHVIIQAPVTEKEK
General information:
TITO was launched using:
RESULT:
Template:
1SE9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14005 for 511 contacts (-27.4/contact) +
2D Compatibility (PS) -8473 + (NN) 3047 + (LL) 1176
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -21705.0 ( -42.48 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_1SE9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SE9-query.scw
PDB file :
Tito_Scwrl_1SE9.pdb
: