Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKDVGIDLGTANVLIHVKGRG-IVVNEPAVVAINNK-----TGQVLAVGTEARDMVGRTPGDITAIKPMKDGVIADFDIVQEMLRFFIQKLNLKTFFSRPRILICCPTNITSVEQKAIREVA-EKSGGKQVFLEEEPKVAAIGAGMEI---FEPSGNMIIDIGGGTADVAVLSMGDIVTS--QSVKVAGNKWDADILNYVKRKYNL---LIGERTAENIKVTIGTACQGAKE--E---------KMEIRGRDLVSGLPKTISITSSEV---EEAIHD------SLHLMVLAAKQVLEQTPPELSADIIDRGIIMTGGGSLLHGLDELMSEQLKVPV--------------------LITENPLDVVALGTGILLDSLTNKKRNRF |
| 1K8K Chain:A ((5-388)) | -LPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKE-VMKGVDDLDFFIGDEAIEK-----PTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRA-EPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKN-IVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSKPKPIDVQVITHHMQRYAVWFGGSMLASTP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131929 for 2481 contacts (-53.2/contact) +
2D Compatibility (PS) -34144 + (NN) -15596 + (LL) 536
1D Compatibility (HY) -11200 + (ID) 2600
Total energy: -194933.0 ( -78.57 by residue)
QMean score : 0.451
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