Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKKVAMGITVVMASSLLLVGCGSSDDSSKDKKSTDTKQTETKKTAKTDGTMTDGTYKLEEKNFDDKGWKGFMSIEVK-D-GKITKANYDYKNKDGKLKS--EDADYEKAMKDKVGTGPQEYLKQLSDS-LVKN----QSAASVEVVSGATHSSDAFINYANQLIQAAQKADTTTISINNLAKMEDGTYKLEEQNYAHGYRVVFSMDVKDGKITKSDYNYVDKDGKLKSDDADYEKNMKAKSGTGPKEYIPALNKSLVEKQDVAAVDTVSGATNSSNQFKIYAAQLQNAAQNGNTDTIKVYNLVEAE |
| 3LWX Chain:A ((85-191)) | ---------------------------------------------------------YIMALHG-AGLWGPLWGYISVDSDKNTIYGADFSHQGETPGLGAEISKPVFSNEFKG---KKIFMS-GEFKSVAVVKPGKSVAGQDYVDGISGGTITSKGVDEMLFNSLSGY------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24371 for 715 contacts (34.1/contact) +
2D Compatibility (PS) -10129 + (NN) 810 + (LL) 10936
1D Compatibility (HY) -4400 + (ID) 750
Total energy: 20838.0 ( 29.14 by residue)
QMean score : 0.425
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