Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEG-YVTDDFLTRLTDREQTFPTGLKLDGYGVALPHTDPECVTEQFIAVITVKDGIPFKLMEDAGQTVEANLIFVLGLNEP--HSQLAVLQQLMGTIQDKDNVAALLRAKDEDEVKQILETIAV
3URR Chain:A ((5-151))
-RLAKILPLENVVIGLSVTSKKRVFEQAGLIFENQNGIARSTVTDNLFARERLGSTGL---GEGVAIPHGRIKGLKHPLAAFVRLAEPIPFEAPDG----QPVSLLIFLLVPEQATQAHLEILSEIAQLLSDRDTRERLHTEPDRDELHRLLTQW--
General information:
TITO was launched using:
RESULT:
Template:
3URR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97412 for 1148 contacts (-84.9/contact) +
2D Compatibility (PS) -15406 + (NN) -4931 + (LL) 852
1D Compatibility (HY) -8800 + (ID) 1600
Total energy: -127297.0 ( -110.89 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_3URR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3URR-query.scw
PDB file :
Tito_Scwrl_3URR.pdb
: