Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLIPPIHRNENGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFREGEH-TLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS
2ZHG Chain:A ((10-124))
----------------ALLTPGEVAKRSGVAVSALHFYESKGLITS-IRNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGV-----TLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIGCGC--------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35839 for 670 contacts (-53.5/contact) +
2D Compatibility (PS) -12364 + (NN) -7973 + (LL) 2952
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -57724.0 ( -86.16 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_2ZHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZHG-query.scw
PDB file :
Tito_Scwrl_2ZHG.pdb
: