Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITIVKGDITEQEVDVIVNAANSGLLGGGGVDGAIHQAAGPDL-------LKECQEVINRIGSCPAGEAVITSAGDLKAT---YIIHAVGPIWKDGEHQE-ANKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIKEIRFVCFDEEN----LKLYNKLINSEVV
1HJZ Chain:B ((14-190))
--LKLAQGDITQYPAKAIVNAANKRLEHGGGVAYAIAKACAGDAGLYTEISKKAMREQFGR-DYIDHGEVVVTPAMNLEERGIKYVFHTVGPICSGMWSEELKEKLYKAFLGPLEKAEEMGVESIAFPAVSAGIYGCDLEKVVETFLEAVKNFK----GSAVKEVALVIYDRKSAEVALKVFER-------
General information:
TITO was launched using:
RESULT:
Template:
1HJZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116768 for 1304 contacts (-89.5/contact) +
2D Compatibility (PS) -18622 + (NN) -16700 + (LL) 1680
1D Compatibility (HY) -12400 + (ID) 2850
Total energy: -165660.0 ( -127.04 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_1HJZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HJZ-query.scw
PDB file :
Tito_Scwrl_1HJZ.pdb
: