Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNLIRLAEIFD-VSLDEHVLAK-TNEVKVERIYENKPLDLRKYNKIYWFIFRNIIRSLLIILAILTFL
1SKV Chain:A ((2-65))
-SKEVLEKELFEMLDEDVRELLSLIHEIKIDRITGNM--DKQKLGKAY-FQVQKIEAELYQLIKVSHH-
General information:
TITO was launched using:
RESULT:
Template:
1SKV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10182 for 302 contacts (-33.7/contact) +
2D Compatibility (PS) -6430 + (NN) -3892 + (LL) 452
1D Compatibility (HY) 3600 + (ID) 300
Total energy: -16752.0 ( -55.47 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_1SKV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SKV-query.scw
PDB file :
Tito_Scwrl_1SKV.pdb
: