Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNTILKDTLSKGLFTAHQKVLIAVSGGIDSINLLQFLYQYQKE-LSISIGIAHINHGQRKESEKEEEYIRQWGQIHDVPVFISYFQ----GIFSEDRARNHRYNFFSKVMREEGYTALVTAHHADDQAETVFMRILRGSRLRYLSGIKQVSAFANGQLIRPFLPYKKELLPN------IFHFEDASNASSDYLRNRIRNVYFPALERENNQLKDSLITLSEETECLFTALTDLTRSIE--------VTNCYDFLRQTHSVQEFLLQDYISKFPDLQVSKEQFRVILKLIRTK---ANIDYTIKSGYFLHKDYESFHITKIHPKTDSFKVEKRLELHNIQ----IFSQY-LFSYGKFISQADITIPIYDTSPIILRRRKEGDRIFLG--NHTKKIRRLFIDEKITLKEREEA-VIGEQNKELIFVIVAGRTYLRKPSEHDIMKGKLYIENLEKR |
| 1NI5 Chain:A ((3-418)) | --------LTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFARTLL--PGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTRGELVQWARQYDLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAEQESLLDELLADDLAHCQSPQGTLQIVPMLAMSDARRAAIIRRWLAGQNAPMPSRDALVRIWQEVALAREDASPCLRL-GAFEIRRYQSQLWWIKSVTGQSEN----IVPWQTWLQPLELPAGLGSVQLN----AGGDIRPPRADEAVSVRFKAPGL-LHIVGRNGGRKLKKIWQELGVPPWLRDTTPLLFYG-ETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69572 for 2711 contacts (-25.7/contact) +
2D Compatibility (PS) -39650 + (NN) 4221 + (LL) 1752
1D Compatibility (HY) 8000 + (ID) 2750
Total energy: -97999.0 ( -36.15 by residue)
QMean score : 0.227
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