Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADYAGKNPLLVGVLKGSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
3H83 Chain:C ((25-203))
MMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYGHSTVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGRKVDLKADYVGFTVPHEFVVGYGLDYKEQYRNLPYVGVLKPSVYS-
General information:
TITO was launched using:
RESULT:
Template:
3H83.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123907 for 1395 contacts (-88.8/contact) +
2D Compatibility (PS) -19507 + (NN) -6965 + (LL) 64
1D Compatibility (HY) -23600 + (ID) 5600
Total energy: -179515.0 ( -128.68 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_3H83.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H83-query.scw
PDB file :
Tito_Scwrl_3H83.pdb
: