Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETID-FTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTDQFIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKGYTPGSFFANGQGGDQGPRAFFANLYS--A--PITDKE--VTKYTTDTKNSVKSMKKIVEWIKKGYLMNGS-QYDGSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPSEDG-K-PDL-EYLVNGFAVFNNKDENKVKASKKFITFIADDKKWGPKDVIRTGAFPVRTSFGDLYKGDKRMMKISKWTQY---YSPYYNTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
3QUF Chain:A ((27-411)) | ---------------------------------GGKTKISFYSYFKD----------NQIGEVVKGFEKKNPDITLDVQYGQDPAQYISTLQTRLAGGKPPTIFNLTMDNRTDVMKSGAALDISGED---FLDGIDDTNFALF-QQDGKTYGMPVSAWVGAFFYNKDILKKAGYDK-FPK--TWDEFIEMGKKINSNGSTAFLEDFNTQ-IAGSFTGLLASYYGEQGKSGDLDADIWSGKSTFTKD-WTPVFKRWEAAAKAGVIPQKSVGLSADQVKQEFVSGNLGVMRSGPWDLPDLQK-----SDIDFGVAPFPAYSKEDGQWINGGPDQGFAIASRASDKEKAAAKKFLAYLNSEEGL-EAFTSAAGTLSLSSKYNAEP-PAELKDVVDNYFKQNKFYWVNWPKSPT--VMSTEGIAQQQKIVQGQISAKDAAKALDAKWATL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QUF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41947 for 3163 contacts (-13.3/contact) +
2D Compatibility (PS) -39446 + (NN) -13006 + (LL) 4432
1D Compatibility (HY) -4800 + (ID) 3650
Total energy: -98417.0 ( -31.12 by residue)
QMean score : 0.450
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