Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------MASGE-----KAKIQRKKSG----AWSMTY---KTLDGNVVATFRPMF-----------KKTGSHCYISTSKMT------KSDGNNNFSIQIYYKGTSN--------VKIKMFDDNPEH-------TMQFSKKKFANNMLNR-------DESTTNHSYDKVLEGDLTPFMGQFSSDSFNQTIVDSGMTYGGYEPKDYYEGRTTVFPAIT-------------KTGYWNGITSH-GSYVIKNDDLPKKIKNYYEIHVYGANSGAINSTGSLKRIFYLVPPKV-EGPDGKVLSKRQVFEVGANNQLISLSYQSPDWWKRYKKSGLEKDLDVDAIYRG--DFSSLKGTWRNGKGEVLTINDDGSTDDGERISIGSTEKSRLPSVGMSSGNFGVSVYL--FQIGVSNPYIENGHTSDTTRPRLAIGLNPGDFPTDAY--YYRY---------------------------------- |
| 2Y26 Chain:A ((1-504)) | GLAGRGVIYIPKDCQANRYLGTLNIRDMISDFKGVQYEKWITAGLVMPTFKIVIRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFLGKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALRSAGLTLGQVPMVGTTKVYNLNSTLVSCVLGMGG-----TVRGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEVKIRSPYHRTPARLLADQSQRDMSSLNFYAIAGPIAPSGETAQLPIVVQIDEIV--RPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGENPFAAMIACHGLHSG--VLDLKLQWSLNTEFGKSSGSVTITKLVGDKAMGLDGPSHVFAIQKLEGTTELLVGNFAGANPNTRFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 40155 for 2226 contacts (18.0/contact) +
2D Compatibility (PS) -37084 + (NN) -2004 + (LL) 312
1D Compatibility (HY) -11600 + (ID) 3350
Total energy: -13571.0 ( -6.10 by residue)
QMean score : 0.099
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