Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEITSAKAMARTVRVSPRKTRLVLDLIRGKNVADAIAILKFTPNKAARVIEKTLNSAIANAENNFGLEKANLVVSETFANEGPTMKRFRPRAKGSASPINKRTTHVTVVVSEK
1I4J Chain:A ((1-110))
----MEAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHDALEDRLYVKAAYVDEGPA---VLPRARGRADIIKKRTSHITVILGEK
General information:
TITO was launched using:
RESULT:
Template:
1I4J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32388 for 781 contacts (-41.5/contact) +
2D Compatibility (PS) -11530 + (NN) -4103 + (LL) 1032
1D Compatibility (HY) -8400 + (ID) 2650
Total energy: -58039.0 ( -74.31 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_1I4J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I4J-query.scw
PDB file :
Tito_Scwrl_1I4J.pdb
: