Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQ-GVLTT----HVLQVSALAVVFLSLVIASI-------SMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDPELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMISLTERWQAKRINFQLD--SKPYTVYSNSDLLMQVWINLLDNAIKYSDDIVDLRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQGNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS |
4I5S Chain:A ((37-432)) | NNNQVKQLNAKVRSLITGHYTDKLKVEDNSDLSELVNNVNDLSEVFRLTHENLAQEKNRLTSILSYMTDGVLATDRSGKITVINDMAQKQLNVTREQALECNILDILDDDSYTYNDLITKTPEIVLTRRDEYDEFITLRIRFALNRRE--SGFISGLIAVLHDATEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDDGALTESVAPSFIKVSLDETNRMMRMITDLLSLSRSHL-----DVELTNFTAFMNYILDRFDQIQSQQSTEIIRDYPDKSVWIEIDTDKMTQVIDNILNNAIKYSPDGGKVTITMQTTDTQ-LILSISDQGLGIPKKDLPLIFDRFYRVDKAR-----GLGLAIAKEIVKQHKGFIWANSEEGEGSTFTIVLP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132947 for 2354 contacts (-56.5/contact) +
2D Compatibility (PS) -35254 + (NN) -8451 + (LL) 640
1D Compatibility (HY) -9200 + (ID) 4350
Total energy: -189562.0 ( -80.53 by residue)
QMean score : 0.354
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