Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIIELLKALFLGVVEGVTEWLPVSSTGHLILVQEFMKLNQSKSFVEMFNIVIQLGAIMAVIVIYFKRLNPFQPGKSAREIRLTWQLWLKVVIACIPSILIALPFDNWFEAHFNFMIPIAIALIFYGFVFIWVEKRNAHLKPQVTELASMSYKTAFLIGCFQVLSIVPGTSRSGATILGAIIIGTSRSVAADFTFFLAIPTMFGYSGLKAVKYFLDGNVLSLDQSLILLVASLTAFVVSLYVIRFLTDYVKRHDFTIFGKYRIVLGSLLILYWLVVHLF |
| 3PMG Chain:A ((1-190)) | VKIVTVKTKAYPD-----------------------QKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEA------------TLVVG----------GDGRFY-MKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKI------------------------KAIGGIILTASHNPG-------------GPNGDFGIKFNISNGGPAPEAITDKIFQISKT------IEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212533 for 1544 contacts (-137.7/contact) +
2D Compatibility (PS) -20197 + (NN) -3403 + (LL) 8224
1D Compatibility (HY) 4800 + (ID) 1200
Total energy: -224309.0 ( -145.28 by residue)
QMean score : 0.262
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