Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKLIVSFLCILLSLTCVNSVQAEEHKDIMQITREAGYDVKDINKPKASIVID-NKGHILWEDNADLERDPASMSKMFTLYLLFEDLAKGKTSLNTTVTATETDQAISKIYEISNNNIHAGVAYPIRELITMTAVPSSNVATIMIANHLSQNNPDAFIKRINETAKKLDMTKTHFYNPSGAVASAFNGLYSPKEYDNNATNVTTARDLSILTYHFLKKYPDILNYTKYPEVKAMVGTPYEETFTTYNYSTPGAKFGLEGVDGLKTGSSPSAAFNALVTAKRQNTRLITVILGVGDWSDQDGEYYRHPFVNALVEKGFKDAKNISSKTPVLKAVK-PKKEVTKTKTKSIQEQPQTK-EQWWTKTDQFIQSHFVSILIVLGTIAILCLLAGIVLLIKRSR |
| 1XP4 Chain:A ((10-321)) | -----------------------------------------FTIAAKHAIAVEANTGKILYEKDATQPVEIASITKLITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPME-ARNYTVEELLEATLVSSANSAAIALAEKIA-GSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGD-NIYPGSKKDEENKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAG-----MTITSTNYMLEGMPAYRGGFDGLKTGTTDKAGESFVGTTVEKGMRVITVVLNADHQDN--NPYARFTATSSLMDYISSTFTLRKIVQ-QGDAYQDSKAPVQDGKEDTVIAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTVVGHLTYEDKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76910 for 2648 contacts (-29.0/contact) +
2D Compatibility (PS) -33338 + (NN) -15516 + (LL) 4148
1D Compatibility (HY) -10400 + (ID) 3700
Total energy: -135716.0 ( -51.25 by residue)
QMean score : 0.498
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